Keto Pumpkin Muffins – Sweet As Honey


These Keto Pumpkin Muffins are moist pumpkin spice muffins with only 3.3 grams of net carbs per serving! Plus, these are gluten-free paleo pumpkin muffins!

I love anything full of pumpkin spice like I did with my Keto Pumpkin Brownies, Almond Flour Pumpkin Bread, or Keto Pumpkin Cookies. This recipe is a low-carb take on classic pumpkin muffins. The classic pumpkin muffin recipe is not suitable for a keto diet.

In fact, most pumpkin muffins from the store contain sugar and white whole-wheat flour, both of which are high in carbs. So, let me share with you how to make delicious keto low-carb pumpkin muffins that are moist, flavorsome, and low in carbs.

Ingredients and Substitutions

Following is what you need to make this keto pumpkin muffins recipe:

Ingredients for Keto Pumpkin Muffins
  • Almond Flour – Almond Flour is the main flour used in this recipe. Almond flour pumpkin muffins stay moist and soft like the original recipe. That’s why I use this flour as the main ingredient in this keto muffin recipe.
  • Coconut Flour – Coconut Flour is a high-fiber flour that gives a cake texture to the muffins. You need a combination of both almond and coconut flours to achieve the best muffin crumb.
  • Erythritol – It’s a safe keto-friendly sweetener with zero carbs and zero calories. You can also use other sugar alcohols like xylitol.
  • Pumpkin Spice – If you can’t find ready-made pumpkin spice in your store, jump to the recipe note section of the recipe card to see the mix of dried spices you need to achieve the same flavor.
  • Baking Powder – If you are intolerant to gluten and you want to ensure that this recipe makes 100% gluten-free pumpkin muffins, choose a gluten-free baking powder.
  • Canned Pumpkin Puree – Pumpkin is a keto-friendly vegetable, and therefore, you can use pumpkin puree in keto recipes. However, always make sure you are using 100% canned pumpkin puree without added sugar or additives. Don’t use pumpkin pie filling in this recipe. It’s very different. Also, homemade pumpkin puree can work if made with steamed or roasted pumpkin, not boiled! Learn how to make your own pumpkin puree.
  • Melted Coconut Oil – or melted butter. If you use coconut oil, make sure you measure the oil melted and use it lukewarm, not piping hot, or it will cook your eggs.
  • Eggs – Use large eggs at room temperature. If your eggs are cold, place them in a warm batter bath to bring them to room temperature quickly.
  • Unsweetened Almond Milk – Or other unsweetened plant-based milk, like soy milk or coconut milk.
  • Vanilla Extract – for flavor.

How To Make Keto Pumpkin Muffins

The trick to making the best pumpkin muffins with keto flour is to measure the flour precisely. In fact, keto flour is high in fiber, and if you add too much of it, the muffins will be too dense, dry, and not as good.

I recommend the scoop and level method to fill your cups and to always use US standard cups in my recipes.

  1. Whisk all the dry ingredients together in a large bowl to avoid lumps.
  2. Make sure the liquid ingredients are at room temperature. Cold eggs make lumps with almond milk and melted coconut oil. H coconut oil will cook your eggs.
  1. Combine the batter with a silicone spatula. This recipe fills a 12-muffin-cup tin. Since they are moist pumpkin muffins, it’s easier if you line the muffin pan with paper liners. It will be much easier to release each muffin.
  2. Bake the muffins in the center rack of a preheated oven at 350°F (180°C). I recommend baking the muffins for 20 minutes, then inserting a skewer in the center of one muffin, and if the center comes out clean, they are ready to remove from the oven. Otherwise, keep baking for an extra 10 minutes. In general, it takes between 20 to 30 minutes max to bake the 12 muffin tin.

Flavor Variations

You can add so many keto-friendly ingredients to this recipe to turn this easy keto pumpkin spice muffins recipe into an even better one! If you want to make:

  • Keto pumpkin chocolate chip muffins – add 1/2 cup of sugar-free chocolate chips into the prepared batter.
  • Keto pumpkin cream cheese muffins – fill each muffin cup with the batter following my recipe below. Then, use a toothpick to swirl a tablespoon of sweet cream cheese in the center of each muffin. To make the cream cheese swirl batter, beat 1 cup of soft cream cheese with 1/2 teaspoon vanilla extract and 2-4 tablespoons of powdered erythritol and spread a tablespoon on top of each muffin.

The addition of sugar-free chocolate chips will raise the net carbs per serving more than a cream cheese swirl. It’s up to you to choose what you prefer and what matches your daily macro the best!

Decorating Pumpkin Muffins

You can add many keto-friendly toppings on top of your prepared muffins. Cool the muffins down before adding any toppings. The best keto toppings are:

  • Keto icing – see recipe card for the recipe. It uses a combo of heavy cream, powdered erythritol, and vanilla.
  • Cream cheese
  • Nuts – add some crunched candied pecan on top of the previous icing.
  • Nut peanut – a dollop of almond butter or peanut butter tastes amazing with these pumpkin spice muffins.

Storage Instructions

These keto low-carb pumpkin muffins contain pumpkin puree and eggs, which means that they can be stored for longer in the fridge. I recommend storing the muffins in a sealed container in the fridge for up to 7 days.

Otherwise, you can freeze the muffins and thaw them on the countertop at room temperature the day before eating.

Keto Pumpkin Muffins

Frequently Asked Questions

How Many Carbs Are In Keto Pumpkin Muffins?

These Keto Pumpkin Muffins have only 3.3 grams of net carbs per serving.

Can I Make Pumpkin Spice Myself?

If you can’t find ready-made pumpkin spices in the store, make your own at home.
The recipe below calls for 3 teaspoons of pumpkin spice. Use this recipe to swap the 3 teaspoons of pumpkin spice recommended in the recipe.
– 1 1/2 teaspoons of ground cinnamon.
– 1/2 teaspoon of ground nutmeg.
– 1/2 teaspoon of ground ginger.
– 1/2 teaspoon of allspice.

More Keto Pumpkin Recipes

If you love keto pumpkin recipes, have a look at my other keto-friendly pumpkin recipes below!

Keto Pumpkin Mug Cake
Keto Pumpkin Brownies
KETO PUMPKIN BREAD with almond flour, easy moist, gluten free #ketopumpkinbread #pumpkin #bread #keto #best #easy #healthy #glutenfree #moist #best #coconutflour #paleo #dairyfree #sugarfree #video
Almond Flour Pumpkin Bread

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  • Before, you start, make sure the eggs, melted coconut oil, and almond milk are at room temperature.

  • Preheat the oven to 350°F (180°C). Line a 12-hole muffin pan with muffin paper cups. Set aside.

  • In a large mixing bowl, beat eggs with unsweetened almond milk, canned pumpkin puree, melted coconut oil, and vanilla. Set aside.

  • In another large mixing bowl, whisk almond flour, coconut flour, erythritol, pumpkin spices, salt, and baking powder.

  • Pour the dry ingredients into the wet ingredients and stir with a spatula to combine. The batter will be thick and dense, not as liquid as regular pumpkin muffins, and that’s what you want.

  • Scoop the batter with a spoon and fill the 12-muffin paper cups evenly. The batter is thick and rough. To achieve a lovely smooth on top of the muffins, I recommend you wet your fingers and pat the top of each muffin to pack and smoothen the batter into the muffin case.

  • Bake the muffins for 20-30 minutes at 350°F (180°C) on the center rack of the oven until a skewer inserted in the center of the muffins comes out clean.

  • Let the muffins cool down for 10 minutes in the pan, then transfer each muffin onto a cooling rack for 2 hours.

The nutrition panel is without frosting. Frosting adds only 0.1 grams of net carbs per muffin.
Pumpkin spice: Replace the 3 teaspoons of pumpkin spices with homemade pumpkin spices. Combine: 1 1/2 teaspoons of ground cinnamon + 1/2 teaspoon of ground nutmeg + 1/2 teaspoon of ground ginger + 1/2 teaspoon of allspice.
Storage: You can store the muffins in a sealed box for 2 days in the pantry or for 1 week in the fridge. Freeze in a sealed airtight container and thaw the day before on the countertop.
Nutrition1 muffin

Serving: 1 muffinCalories: 202.2 kcal (10%)Carbohydrates: 6.4 g (2%)Fiber: 3.1 g (13%)Net Carbs: 3.3 gProtein: 5.7 g (11%)Fat: 18.2 g (28%)Saturated Fat: 9.4 g (59%)Cholesterol: 62 mg (21%)Sodium: 192.6 mg (8%)Potassium: 51 mg (1%)Sugar: 1.3 g (1%)Vitamin A: 2208.3 IU (44%)Vitamin C: 0.6 mg (1%)Calcium: 107.3 mg (11%)Iron: 1.2 mg (7%)

Carine Claudepierre

About The Author

Carine Claudepierre

Hi, I’m Carine, the food blogger, author, recipe developer, published author of a cookbook and many ebooks, and founder of Sweet As Honey.

I have an Accredited Certificate in Nutrition and Wellness obtained in 2014 from Well College Global (formerly Cadence Health). I’m passionate about sharing all my easy and tasty recipes that are both delicious and healthy. My expertise in the field comes from my background in chemistry and years of following a keto low-carb diet. But I’m also well versed in vegetarian and vegan cooking since my husband is vegan.

I now eat a more balanced diet where I alternate between keto and a Mediterranean Diet

Cooking and Baking is my true passion. In fact, I only share a small portion of my recipes on Sweet As Honey. Most of them are eaten by my husband and my two kids before I have time to take any pictures!

All my recipes are at least triple tested to make sure they work and I take pride in keeping them as accurate as possible.

Browse all my recipes with my Recipe Index.

I hope that you too find the recipes you love on Sweet As Honey!

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